PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C00724.1.p
Common NameEUGRSUZ_C00724, LOC104436345
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB
Protein Properties Length: 255aa    MW: 28928.9 Da    PI: 8.1043
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C00724.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.8e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+ Ed++l d++k +G g W+ I+++ g++R++k+c++rw++yl
  Eucgr.C00724.1.p 14 RGAWTALEDQILTDYIKAHGEGKWRNIPKKSGLKRCGKSCRLRWLNYL 61
                      89********************************************97 PP

2Myb_DNA-binding551.8e-1767111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ T+eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Eucgr.C00724.1.p  67 RGNITPEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTI 111
                       7999******************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.156961IPR017930Myb domain
SuperFamilySSF466891.31E-2912108IPR009057Homeodomain-like
SMARTSM007176.4E-141363IPR001005SANT/Myb domain
PfamPF002493.0E-141461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.6E-241568IPR009057Homeodomain-like
CDDcd001677.58E-101661No hitNo description
PROSITE profilePS5129426.06762116IPR017930Myb domain
SMARTSM007171.4E-1666114IPR001005SANT/Myb domain
PfamPF002498.2E-1667111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-2569116IPR009057Homeodomain-like
CDDcd001672.34E-1271112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MGRNPCCTKE GLNRGAWTAL EDQILTDYIK AHGEGKWRNI PKKSGLKRCG KSCRLRWLNY  60
LRPDIKRGNI TPEEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT ILGKKVQGEE  120
PKQPKKDETK KPKTKQPNKN LTPTPAANTN PNAIRPQPAK CNKITVYPEP QPEASVTDFS  180
SVQDLVKSSE GSPSILSEEE DFRNLPMDFS LSELLLSDVP ESEFWKLCQF DNTLDQPFLF  240
SEEMMNGWAA EDGF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C2e-271211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C00724.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010047392.10.0PREDICTED: transcription factor WER-like
TrEMBLA0A059CM760.0A0A059CM76_EUCGR; Uncharacterized protein
STRINGVIT_04s0008g01820.t012e-99(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM4282646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.11e-61myb domain protein 3